DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and rpt-5

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_491672.1 Gene:rpt-5 / 172238 WormBaseID:WBGene00004505 Length:430 Species:Caenorhabditis elegans


Alignment Length:412 Identity:166/412 - (40%)
Similarity:243/412 - (58%) Gaps:44/412 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TPMPDN-LRVKALSEYRKKLLEHK--EIEGRLKEKREEIK-------------DLTKLYDKSEN- 53
            |.:.|| :|:.. ||.::  :.|.  .::.|:||..|.||             :|..|.|.:|. 
 Worm    38 THLLDNEIRIMR-SEVQR--INHSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDNTEEE 99

  Fly    54 ----DLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRY--VVGCRRQLDKAKLKSGTRVALDMTT 112
                ||.|             |.|:...|..:|....:  |||.   :|..:||.|..|.::..:
 Worm   100 GANVDLDA-------------QKTKCAVIKTSTRATYFLPVVGL---VDPDELKPGDLVGVNKDS 148

  Fly   113 LTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKG 177
            ..|:..||.|.|..|..|..::.....||.|||...||:||.|.:.||:.:.:.|:.:||.||||
 Worm   149 YLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKG 213

  Fly   178 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDE 242
            .|:|||||||||::|||||:|..:.|||:....:|..:||:.|:|:|:.|..|::..|.|||:||
 Worm   214 VLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDE 278

  Fly   243 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKI 307
            :||||.:||....:.|||:|||::|||||:|||.....:|:|.||||.|.|||||||.|||||||
 Worm   279 LDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKI 343

  Fly   308 EIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQ 372
            |:|.|||.||..|::||:.|:..:.::::|.:.:.:|:||||..:.||.|||:.|:|.:...::.
 Worm   344 ELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILH 408

  Fly   373 EDFMKAVRKVSDNKKLESKLDY 394
            ||||.|:.:|...||  :.|:|
 Worm   409 EDFMDAILEVQAKKK--ASLNY 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 159/395 (40%)
rpt-5NP_491672.1 PRK03992 32..423 CDD:179699 162/403 (40%)

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