DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and YME1L

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_061509678.1 Gene:YME1L / 1279395 VectorBaseID:AGAMI1_003770 Length:764 Species:Anopheles gambiae


Alignment Length:266 Identity:102/266 - (38%)
Similarity:148/266 - (55%) Gaps:6/266 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 NMSHEDPGD--VTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLL 191
            |....||.|  ||:..:.|..:..:||:||:|. |.||..|..:|...|||.||.||||||||||
Mosquito   309 NQVEVDPEDITVTFEDVKGCDEAKQELKEVVEF-LKNPGKFSNLGGKLPKGVLLVGPPGTGKTLL 372

  Fly   192 ARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 256
            |||||.:....|.........:..:|:.||.:|::|..|::..||:||:||||::|.:|  ..:.
Mosquito   373 ARAVAGEAGVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKERAPCVIFIDEIDSVGAKR--TNSV 435

  Fly   257 ADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 321
            ......:|:.:||::||||.....|.::.||||.|.||.|||||||.|.::.:|.|:...|.|||
Mosquito   436 LHPYANQTINQLLSEMDGFQQNEGVIVLGATNRRDDLDQALLRPGRFDVEVVVPTPDFTGRKEIL 500

  Fly   322 KIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNK 386
            ..:..||... ||:.:.:.:.:..|.|||:.|:..:|.|.|.....|.|..:....|..||....
Mosquito   501 TYYLGKILSR-EINIDQLARGTTGFTGADIENMVNQAALRAAIDGAETVSMKHLENARDKVLMGP 564

  Fly   387 KLESKL 392
            :.:|:|
Mosquito   565 ERKSRL 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 100/259 (39%)
YME1LXP_061509678.1 None

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