DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and LOC1273891

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_312924.4 Gene:LOC1273891 / 1273891 -ID:- Length:438 Species:Anopheles gambiae


Alignment Length:381 Identity:165/381 - (43%)
Similarity:250/381 - (65%) Gaps:17/381 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LRVKALSEYRKKLLEHKEI--EGRLKEKREEIKDLTKLYDKSE-NDLK-ALQSVGQIVGEVLKQL 72
            |:::.:.:|  .|:|.:.|  :.|||.:.|:|::     ::|: :||: :..|||     .|:::
Mosquito    61 LKLERIKDY--LLMEEEFIRNQERLKPQEEKIEE-----ERSKVDDLRGSPMSVG-----TLEEI 113

  Fly    73 TEDKFIVKATN-GPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 136
            .:|...:.:|: |..:.|.....:||.:|:.|..|.|:.....::..|..:.||:|..|..|...
Mosquito   114 IDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAP 178

  Fly   137 DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 201
            ..||:.||||..||:|::|.:||||.:||.:..:||.||||.:|||||||||||||:|||:|..|
Mosquito   179 QETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 243

  Fly   202 NFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 266
            .||:||.|.::.||:|:..:|:||:|..|.:|.|.|:|:|||||:|.:|:...:..:||||||::
Mosquito   244 TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTML 308

  Fly   267 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH 331
            |||||:|||||.|.||:||||||.:||||||:||||:|||||.|||:|:.:..|..||..::...
Mosquito   309 ELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTARMTLA 373

  Fly   332 GEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKK 387
            .:::...::...|:.:|||::.:||||||.|:|..|..|..|||.|:...|...||
Mosquito   374 EDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 162/378 (43%)
LOC1273891XP_312924.4 PTZ00361 1..438 CDD:185575 165/381 (43%)

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