DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and Rpt5

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_310465.3 Gene:Rpt5 / 1271616 VectorBaseID:AGAMI1_003806 Length:427 Species:Anopheles gambiae


Alignment Length:412 Identity:166/412 - (40%)
Similarity:239/412 - (58%) Gaps:36/412 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VTATPMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGE 67
            |:.|.:.|| .:|.:..      |...|...|:.:.|:|||.|:       .:|..:::..:|..
Mosquito    30 VSRTRLMDN-EIKIMKS------EVVRINHELQTQNEKIKDNTE-------KIKVNKTLPYLVSN 80

  Fly    68 VLKQLTEDK--------------------FIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTT 112
            |::.|..|.                    .::|.:....|.:.....:|..|||.|..|.::..:
Mosquito    81 VIELLDVDPQEEEDDGAVVVLDSQRKGKCAVIKTSTRQTYFLPVIGLVDSDKLKPGDLVGVNKDS 145

  Fly   113 LTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKG 177
            ..|:..||.|.|..|..|..::.....||.||||..||:||.|.:.||:.:.:.|..:||.||||
Mosquito   146 YLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKDKFKNLGIHPPKG 210

  Fly   178 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDE 242
            .||||||||||||||||.|:|..:.|||:....:|..:||:.|:|:|:.|..|::..|.|||:||
Mosquito   211 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDE 275

  Fly   243 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKI 307
            :||||.:||....:.|||:|||::|||||:|||.|...:|:|.||||.|.|||||||.|||||||
Mosquito   276 LDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 340

  Fly   308 EIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQ 372
            |.|.|||:||..|::||:.|:....::::|.:.:.:|:||||..:.||.|||:.|:|.....||.
Mosquito   341 EFPHPNEEARARIMQIHSRKMNVSPDVNFEELARSTDDFNGAQCKAVCVEAGMIALRRSAVSVIH 405

  Fly   373 EDFMKAVRKVSDNKKLESKLDY 394
            ||||.|:.:|...||  :.|:|
Mosquito   406 EDFMDAIMEVQSKKK--ANLNY 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 158/393 (40%)
Rpt5XP_310465.3 PRK03992 27..420 CDD:179699 162/403 (40%)

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