Protein Alignment Rpt4 and Psmc4

DIOPT Version :10

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: XP_063123979.1
• Gene: Psmc4 / 117262
• RGDID: 621102
• Length: 442
• Species: Rattus norvegicus
• Alignment Length: 351
• Identity: 153/351 - (43%)
• Similarity: 224/351 - (63%)
• Gaps: 1/351 - (0%)

  Fly     7 PMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQ 71
            |.|::|. ...|.|:|...|.:.:|.:.:..::|.|:|.|.:..::.::|.:||:..::|:.|:.
  Rat    32 PEPEDLE-DLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95

  Fly    72 LTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 136
            :.::..||.:|.|..|.|.....:|:..||....|||...:..::..||.|.|..:..::.:...
  Rat    96 VDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160

  Fly   137 DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 201
            ||.|:.|||:..|.:|:||.:||||.:.||:.::||.||:|.|:|||||.|||:||:|||....|
  Rat   161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 225

  Fly   202 NFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 266
            .|::||.|..|.||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||.|:
  Rat   226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290

  Fly   267 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH 331
            ||||||||||....||:||||||.||||||||||||||||||.|||:.:.:..|......|:...
  Rat   291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLS 355

  Fly   332 GEIDYEAIVKLSDNFNGADLRNVCTE 357
            .|:|.|..|...|..:|||:.::|.|
  Rat   356 EEVDLEDYVARPDKISGADINSICQE 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	150/345 (43%)
Psmc4	XP_063123979.1	None