DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Spx and bru2

Sequence 1:NP_511058.1 Gene:Spx FlyBaseID:FBgn0015818 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001036356.1 Gene:bru2 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster

Alignment Length:387 Identity:84/388 (22%)
Similarity:143/388 (37%) Gaps:108/388 (28%)


  Fly    15 IYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEF------LSEEDADYGIKI 73
            ::.|.:.....||.|.::|.|.|||..:::.:|:||.:.:|..||.:      |..:||.:.||.
  Fly   297 MFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 361

  Fly    74 MNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPET 138
            ::.:.   .||::..|.:..:|   ...:|:|.|:.:..|..:...|:..|.| :...::|| :.
  Fly   362 LDGMH---HPIQMKPADSENRN---ERKLFVGMLNKKYTEADVRQLFTGHGTI-EECTVLRD-QA 418

  Fly   139 GKSKSFAFINFASFEASDAAMDAMNGQYL---CNRPISVSYAFKKDHKGERHGSAAERLLAAQNP 200
            |:||..||:.||:.:.:..|:.|::....   |:.|:.|.:|..:..|.::              
  Fly   419 GQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQK-------------- 469

  Fly   201 STHADRPHQLFADAPVQTMMPQMPGQIPAQMPGQMMPPPMMAPPPPVVPVSNNNMGMLAPPPPVP 265
                 :..|:.|...:.|......|   |..|.......::|.||.....:.:....||..|.|.
  Fly   470 -----KMQQIHAFCGINTPSGATAG---AATPTINAATALIAAPPSAGRTNPSMAAALAAVPQVQ 526

  Fly   266 Q---PAPFPATIPP--------PPLPP-----------------MTGGQPP-------------- 288
            |   .|..|.|:.|        ..|.|                 ..|..|.              
  Fly   527 QAGSAATAPTTLVPLNSTTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGY 591

  Fly   289 -LPPAMGIP-----PPPRMMQPNAWAPPGM---------------------PAPPPRPPPTN 323
             |.||..:|     .||.....::...||:                     .||||.|.||:
  Fly   592 GLSPAHYLPGLNFHHPPENSAHHSQHSPGIGGASAASLSAAAATAASNPLGGAPPPTPTPTS 653

Known Domains:


GeneSequenceDomainRegion External IDIdentity
SpxNP_511058.1 RRM1_SF3B4 15..88 CDD:240780 22/79 (28%)
RRM2_SF3B4 99..181 CDD:240781 22/85 (26%)
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 23/81 (28%)
RRM2_Bruno_like 381..461 CDD:241080 22/82 (27%)
RRM_SF 801..892 CDD:302621
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR24012
RoundUp 00.000 Not matched by this tool.
11.100

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