DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and MLC1

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_011409.1 Gene:MLC1 / 852772 SGDID:S000003074 Length:149 Species:Saccharomyces cerevisiae


Alignment Length:139 Identity:42/139 - (30%)
Similarity:70/139 - (50%) Gaps:19/139 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAPGPINFTMFLTLFGERLQG--- 98
            |:.|.:.|:...|.:.|:.|.|.|.::|.|||:..:..::| |...:.....|||  :::.|   
Yeast     8 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN-ADSSLRDASSLTL--DQITGLIE 69

  Fly    99 -----------TDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPI-K 151
                       ...||.:| ||..||:|:.|.:....||.:||.:|::.||.:|||:.:...: .
Yeast    70 VNEKELDATTKAKTEDFVK-AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDS 133

  Fly   152 NGLFDYLEF 160
            ||..||.:|
Yeast   134 NGEIDYKKF 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 42/139 (30%)
MLC1NP_011409.1 PTZ00184 8..143 CDD:185504 42/139 (30%)

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