DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and CG17272

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster


Alignment Length:138 Identity:39/138 - (28%)
Similarity:67/138 - (48%) Gaps:4/138 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FDQAQIAEFKEAFNMIDQNRDGFVEK-EDLHDMLASLGKNPTDDYLDGMMNEAPGPINFTMFLTL 91
            |.:..|.||:|.|.:.  .|.|.:.. ::|..::.|||.:||...|...:.:..|.::|..||.:
  Fly     5 FKEQDIDEFRECFYLF--ARSGQINNLDELTVIMRSLGLSPTIQELVSYLKQKNGKMSFADFLDI 67

  Fly    92 FGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPI-KNGLF 155
            ..:..:.....|.:..||...|.:|.|.:...:||.||...|:..:..:||.::|||.: .|...
  Fly    68 MHQHSKVESLPDEVIAAFKAADPQNKGTISARQLRNLLQNWGEGLSMREVDNIFREANVNNNSTV 132

  Fly   156 DYLEFTRI 163
            .|.:|.:|
  Fly   133 RYADFVKI 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 39/138 (28%)
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 39/138 (28%)

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