DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sqh and Sol1

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001097756.1 Gene:Sol1 / 41513 FlyBaseID:FBgn0085431 Length:695 Species:Drosophila melanogaster


Alignment Length:184 Identity:38/184 - (20%)
Similarity:56/184 - (30%) Gaps:81/184 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP-------------GPINFTM--------- 87
            :|..|....:.||.:....|:..|.:.|.|.....|             |....||         
  Fly   442 ENSTGCQPGDALHVVTELRGRYETQELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYGF 506

  Fly    88 -----FLTLFG-----------------ERLQGT--DP-------EDVIKN--AFGCFDEENMGV 119
                 |||.||                 ||:.|.  .|       |:|:.|  .:|..||     
  Fly   507 RAEYRFLTNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFPGYYLENVVCNYYFYGASDE----- 566

  Fly   120 LPEDRLRELLTTMGDRFTDEDVDEM----YREAPIKNGLFDYLEFTRILKHGAK 169
                  |.:|     .||..|::.:    ::.|.      ||:||:..:....|
  Fly   567 ------RVVL-----HFTYFDIEGIGSCDHQTAS------DYIEFSNFMSTDRK 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 37/177 (21%)
Sol1NP_001097756.1 CUB 195..318 CDD:238001
CUB <414..512 CDD:238001 12/69 (17%)
CUB 527..644 CDD:238001 21/99 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.