DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and mylpfa

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_571263.1 Gene:mylpfa / 30429 ZFINID:ZDB-GENE-990712-15 Length:169 Species:Danio rerio


Alignment Length:171 Identity:83/171 - (48%)
Similarity:115/171 - (67%) Gaps:7/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK-NPT 68
            |.|.|||.    ....:||||:||:|:||.|:||||.:|||||||.:.|:||.|:|||:|: |..
Zfish     4 KKAKRRAA----GGEGSSNVFSMFEQSQIQEYKEAFTIIDQNRDGIISKDDLRDVLASMGQLNVK 64

  Fly    69 DDYLDGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMG 133
            ::.|:.|:.||.||||||:|||:|||:|:|.||||||.:||...|.|..|.:.::.|.|||||..
Zfish    65 NEELEAMIKEASGPINFTVFLTMFGEKLKGADPEDVIVSAFKVLDPEGTGSIKKEFLEELLTTQC 129

  Fly   134 DRFTDEDVDEMYRE-APIKNGLFDYLEFTRILKHGAKDKDE 173
            ||||.|::..::.. .|...|..||.....::.|| ::|:|
Zfish   130 DRFTAEEMKNLWAAFPPDVAGNVDYKNICYVITHG-EEKEE 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 70/138 (51%)
mylpfaNP_571263.1 PTZ00184 22..158 CDD:185504 70/135 (52%)

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