DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Myl2

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_034991.3 Gene:Myl2 / 17906 MGIID:97272 Length:166 Species:Mus musculus


Alignment Length:161 Identity:84/161 - (52%)
Similarity:114/161 - (70%) Gaps:3/161 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK-NPTDDYLDGMMN 77
            |||.:..:||||:||:|.||.||||||.::|||||||::|.||.|..|:||: |..::.:|.|:.
Mouse     7 KKRIEGGSSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIK 71

  Fly    78 EAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVD 142
            |||||||||:|||:|||:|:|.|||:.|.|||..||.|..|.|..|.:||:|||..:||:.|::|
Mouse    72 EAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGSLKADYVREMLTTQAERFSKEEID 136

  Fly   143 EMYRE-APIKNGLFDYLEFTRILKHGAKDKD 172
            :|:.. .|...|..||.....|:.|| ::||
Mouse   137 QMFAAFPPDVTGNLDYKNLVHIITHG-EEKD 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 72/138 (52%)
Myl2NP_034991.3 PTZ00184 20..160 CDD:185504 73/139 (53%)

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