DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Myl3

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_034989.1 Gene:Myl3 / 17897 MGIID:97268 Length:204 Species:Mus musculus


Alignment Length:169 Identity:47/169 - (27%)
Similarity:76/169 - (44%) Gaps:27/169 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDG--FVEKEDLHDMLASLGKNPT--------- 68
            |.|:...|.:...|...||.||||||.:.|:...|  .:......|:|.:||:|||         
Mouse    42 KEAEFDASKIKIEFTPEQIEEFKEAFLLFDRTPKGEMKITYGQCGDVLRALGQNPTQAEVLRVLG 106

  Fly    69 ---DDYLDGMMNEAPGPINFTMFLTLFGERLQGTDP---EDVIKNAFGCFDEENMGVLPEDRLRE 127
               .:.|:..|      ::|..||.:.....:..|.   ||.:: ....||:|..|.:....||.
Mouse   107 KPKQEELNSKM------MDFETFLPMLQHISKNKDTGTYEDFVE-GLRVFDKEGNGTVMGAELRH 164

  Fly   128 LLTTMGDRFTDEDVDEMYREAPIKNGLFDYLEFTRILKH 166
            :|.|:|:|.|:::|:::.......||..:|..|   :||
Mouse   165 VLATLGERLTEDEVEKLMAGQEDSNGCINYEAF---VKH 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 42/153 (27%)
Myl3NP_034989.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 2/4 (50%)
PTZ00184 53..203 CDD:185504 44/158 (28%)

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