DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and mlc-5

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_499813.1 Gene:mlc-5 / 176796 WormBaseID:WBGene00011734 Length:142 Species:Caenorhabditis elegans


Alignment Length:134 Identity:37/134 - (27%)
Similarity:68/134 - (50%) Gaps:4/134 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 IAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMN--EAPGPINFTMFLTLFGER 95
            :|:.:|.|...|...|..:..:.:.|:|.:||:|||:..:...:.  :....::|..|:.:|...
 Worm     4 LADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVPIFQSV 68

  Fly    96 LQGTDPEDVIKNAFGC--FDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIKNGLFDYL 158
            .:..:...|.:...|.  ||:|..|::....||.||||:|:|.:|||||::.......:|..:..
 Worm    69 SKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLSGHNDSHGNVNIS 133

  Fly   159 EFTR 162
            :|.|
 Worm   134 DFVR 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 37/134 (28%)
mlc-5NP_499813.1 PTZ00184 2..140 CDD:185504 37/134 (28%)

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