DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and LOC1277208

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_316652.5 Gene:LOC1277208 / 1277208 VectorBaseID:AGAMI1_009661 Length:150 Species:Anopheles gambiae


Alignment Length:143 Identity:42/143 - (29%)
Similarity:72/143 - (50%) Gaps:7/143 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DQAQIAE--FKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP----GPINFTM 87
            :|:::.|  |:|.|.|.|::..|.:...:|.|::..||.|||...|:.|:.|..    |.|.:..
Mosquito     6 EQSEMQEQQFREMFEMFDRDGSGSISTTELGDLMRVLGLNPTMAELEQMVYEVDSDGNGRIEWEE 70

  Fly    88 FLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK- 151
            |:.|...:.:....|..:..||..||....|.|..|.|.:::...|:|.|..:::::..||.|. 
Mosquito    71 FVALMKNKSREPVDEKELYAAFKVFDRNGDGFLSVDELSDVMQNFGERLTQRELEDLLAEADIDG 135

  Fly   152 NGLFDYLEFTRIL 164
            :|..:|.||..:|
Mosquito   136 DGRINYEEFVYML 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 41/141 (29%)
LOC1277208XP_316652.5 None

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