DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and myl7

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_012813980.1 Gene:myl7 / 100135145 XenbaseID:XB-GENE-964041 Length:173 Species:Xenopus tropicalis


Alignment Length:174 Identity:91/174 - (52%)
Similarity:116/174 - (66%) Gaps:4/174 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK 65
            |:|||.||:.|.  |||||.:||||:||:|:||.||||||:.|||||||.:.|.||.:....|||
 Frog     1 MASRKAAGKAAA--KRAQRGSSNVFSMFEQSQIQEFKEAFSCIDQNRDGIITKSDLKETYMQLGK 63

  Fly    66 -NPTDDYLDGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELL 129
             |..:|.||.|:.|..||||||:||:||||:|.||||||.|..||...|....|.:.:|.|::||
 Frog    64 MNVNEDELDEMLKEGKGPINFTVFLSLFGEKLNGTDPEDSILAAFKILDPNATGNINKDELKQLL 128

  Fly   130 TTMGDRFTDEDVDEMYREAPIK-NGLFDYLEFTRILKHGAKDKD 172
            .|..|:||.|:||:|:...||. .|..||.....|:.||.:.:|
 Frog   129 MTQADKFTAEEVDQMFAVTPIDVAGNIDYKSLCYIITHGDEKED 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 71/138 (51%)
myl7XP_012813980.1 PTZ00184 25..165 CDD:185504 72/139 (52%)

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