DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4666 and Them6

DIOPT Version :10

Sequence 1:NP_572292.1 Gene:CG4666 / 31541 FlyBaseID:FBgn0029838 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001007659.1 Gene:Them6 / 300015 RGDID:1359378 Length:207 Species:Rattus norvegicus


Alignment Length:206 Identity:77/206 - (37%)
Similarity:106/206 - (51%) Gaps:23/206 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSWLVVLLIL----YVIWDVNYFIRCVFTVFAGRLFQ-RKRKVTDTTTIYGLCTSQDVDIFIRHM 60
            |..|||.|.|    :.:.|..|.:|....|...||.| |.|.:.......|.....|:|:.: ||
  Rat     2 MELLVVSLSLALAFFALLDGWYLVRVPCAVLRARLLQPRVRDLLAEQLYAGRVLPSDLDLLL-HM 65

  Fly    61 NNARYLRELDFARFHFYALTGLYERIRDRRGGAVQGASSVRYRRTIPIFHPYKIQTKLIWWDDKA 125
            ||||||||.|.||.......|:...:||.....|..||..||||::.:|.|:::.|:|:.|||:|
  Rat    66 NNARYLREADVARAAHLTRCGVLGALRDLGAHTVLAASCARYRRSLRLFEPFEVHTRLLGWDDRA 130

  Fly   126 IYLEQQFITLSDGFVRAVAMSKQNITNCNVLEVLKTYPE---------TAQRPEKPEELKLWLDA 181
            .|||.:|::|.||||.|:...:|:        ||.|.|:         ..:.||.||:||.|:..
  Rat   131 FYLEARFVSLRDGFVCALLRFRQH--------VLGTSPDRVVQHLCKRRVEPPELPEDLKHWITY 187

  Fly   182 IELSSQKLRKD 192
            .|.|||.||.:
  Rat   188 NETSSQLLRAE 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4666NP_572292.1 4HBT_2 48..179 CDD:463826 54/139 (39%)
Them6NP_001007659.1 4HBT_2 54..185 CDD:463826 54/139 (39%)

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