DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5966 and Lipc

DIOPT Version :10

Sequence 1:NP_572286.1 Gene:CG5966 / 31532 FlyBaseID:FBgn0029831 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:506 Identity:134/506 - (26%)
Similarity:209/506 - (41%) Gaps:128/506 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 RRALDQPK-----YLDLND----------PESVQGMGMNPKGKIFLLVHGY--LESGEI------ 126
            |:.|.:|:     :.|.:|          ||::|..|.|....:.:::||:  .||..:      
  Rat    41 RKPLQKPEIRFLLFKDESDRLGCQLRPQHPETLQECGFNSSHPLVMIIHGWSGSESATVGKDSDN 105

  Fly   127 ---------PWMWDMAKALLAHEPEGRASVVLIDWGGGASPPYVQAVANIRLVGAITAHVVHMLY 182
                     .|:|.:..||.:.:.: ..:|.|:||...|...|..||.|.|:||...|.::..|.
  Rat   106 DSQVDGLLETWIWKIVGALKSRQSQ-PVNVGLVDWISLAYQHYAIAVRNTRVVGQEVAALLLWLE 169

  Fly   183 EELRLPNLDNVHIIGHSLGAHLSGYAGYHLQHDFGLKPARITGLDPAAPLFTDTDPIVRLDKTDA 247
            |.::. :...||:||:|||||:||:||..:...  .|..||||||||.|:|..|.|..||...||
  Rat   170 ESMKF-SRSKVHLIGYSLGAHVSGFAGSSMGGK--RKIGRITGLDPAGPMFEGTSPNERLSPDDA 231

  Fly   248 HFVDIVHTDANPLMKGGLGINMRLGHVDFFPNGGFDNPGCN--KKFQDVVKKKTLFLTMQEFLGC 310
            :|||.:||.....|...:||...:.|.||:||||...|||:  :.::.:.:.....:|  :.:.|
  Rat   232 NFVDAIHTFTREHMGLSVGIKQPIAHYDFYPNGGSFQPGCHFLELYKHIAEHGLNAIT--QTIKC 294

  Fly   311 NHIRSQQYFTESI-GSQCPFLGITCDSFESFKDTKCTSCEEPGHTCLRMGYHSQEDYQEQVDLGQ 374
            .|.||...|.:|: .|.....|..|.:.:||....|.:|::  ..|..:||..:.|...:     
  Rat   295 AHERSVHLFIDSLQHSNLQNTGFQCSNMDSFSQGLCLNCKK--GRCNSLGYDIRRDRPRK----- 352

  Fly   375 LQQGDSPGVFYLWTGDSKPFCRLHYRITVRVSGHDES--------TLHG------------GEVG 419
                  ....:|.|....||...||:..::.....|.        ||.|            || |
  Rat   353 ------SKTLFLITRAQSPFKVYHYQFKIQFINQMEKPIEPTFTMTLLGTKEEIKKIPITLGE-G 410

  Fly   420 ILSIQLHDALV---KKAGKNERAATEMMKFSQKAMYFEPGYEYKALVAGRNL-----------RE 470
            |.|.:.:..|:   |..|:     ..|:||.         :|..|:.|  |:           .|
  Rat   411 ITSNKTYSLLITLDKDIGE-----LIMLKFK---------WENSAVWA--NVWNTVQTIMLWDTE 459

  Fly   471 PEYATVNWEYPTNILNPLTWRILSAPRIYLEYILIEAMESSDLYLKLCPQH 521
            |.||                      .:.|:.|.::|.|:.. .:..||.:
  Rat   460 PHYA----------------------GLILKTIWVKAGETQQ-RMTFCPDN 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5966NP_572286.1 Pancreat_lipase_like 76..390 CDD:238363 101/339 (30%)
LipcXP_006243421.1 Lipase 18..366 CDD:395099 101/343 (29%)
PLAT_LPL 369..504 CDD:238856 31/159 (19%)

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