DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R1 and PRE10

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_015007.1 Gene:PRE10 / 854544 SGDID:S000005889 Length:288 Species:Saccharomyces cerevisiae


Alignment Length:150 Identity:43/150 - (28%)
Similarity:64/150 - (42%) Gaps:6/150 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            ||::.||:.:||...|||:...:...|...:|..||. ||..:..||.|..:|...|...:....
Yeast    29 KAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNV-KIQVVDRHIGCVYSGLIPDGRHLVNRG 92

  Fly   108 SAELDLHRLNTERRVPVVCASMML-----RRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGSN 167
            ..|....:...:..:|:...:..|     ..||:......|.:.:.||||..|..||.:.|.||.
Yeast    93 REEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSY 157

  Fly   168 DKIPYAAMGSGTLAAMSVLE 187
            .....||.|.|..:|.:.||
Yeast   158 WGYKGAATGKGRQSAKAELE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 39/143 (27%)
Pr_beta_C 240..274 CDD:463597
PRE10NP_015007.1 proteasome_alpha_type_3 5..219 CDD:239720 42/149 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.