DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PRE3

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_012533.1 Gene:PRE3 / 853456 SGDID:S000003538 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:198 Identity:58/198 - (29%)
Similarity:104/198 - (52%) Gaps:9/198 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LSKGYEPPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAAD 99
            |.||     .:..||||:.:.:|||||||||:|.|.|..::::...|:..:.|.|:||.:|:|||
Yeast    11 LKKG-----EVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAAD 70

  Fly   100 TEMITLTTSAELDLHRLNTERRVP-VVCASMMLRRTLFRYQGHIGAALVMGGVDTTGP-QLYCIY 162
            |:.|.......|:|:  .::...| ...|:.:.:...:..:.::.|.:::.|.|.... ::|.|.
Yeast    71 TQAIADIVQYHLELY--TSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIP 133

  Fly   163 PCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVIT 227
            ..||..|:|||..|||:.......:..::.::..|:....::.::|..:..|..||..|.:.|:|
Yeast   134 LGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLT 198

  Fly   228 AKG 230
            |.|
Yeast   199 AAG 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 54/184 (29%)
Pr_beta_C 240..274 CDD:463597
PRE3NP_012533.1 proteasome_beta_type_6 20..204 CDD:239731 54/184 (29%)
Blue background indicates that the domain is not in the aligned region.

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