DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PUP2

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_011769.1 Gene:PUP2 / 853168 SGDID:S000003485 Length:260 Species:Saccharomyces cerevisiae


Alignment Length:202 Identity:62/202 - (30%)
Similarity:94/202 - (46%) Gaps:24/202 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADT-EMITLT 106
            :|||.|::.:||..|:||:||.:.||| .|::...:..||..:..||.|..:|..||. .||...
Yeast    29 EAIKLGSTAIGIATKEGVVLGVEKRAT-SPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 92

  Fly   107 TSAELDLHRL------NTERRVPVVCASMMLR---------RTLFRYQGHIGAALVMGGVDT-TG 155
            .:|.: .|.|      |.|.....|| .:.||         |.:.|   ..|.||::.|.|. .|
Yeast    93 RTAAV-THNLYYDEDINVESLTQSVC-DLALRFGEGASGEERLMSR---PFGVALLIAGHDADDG 152

  Fly   156 PQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSN 220
            .||:...|.|:..:....|:|||:..|.:.|.:.|...|.|::.:.||.:.:.. |..:....:|
Yeast   153 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQ-VMEEKLDENN 216

  Fly   221 IDLCVIT 227
            ..|..||
Yeast   217 AQLSCIT 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 58/196 (30%)
Pr_beta_C 240..274 CDD:463597
PUP2NP_011769.1 proteasome_alpha_type_5 8..222 CDD:239722 60/199 (30%)
Blue background indicates that the domain is not in the aligned region.

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