DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R1 and PAF2

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_175158.1 Gene:PAF2 / 841128 AraportID:AT1G47250 Length:277 Species:Arabidopsis thaliana


Alignment Length:203 Identity:55/203 - (27%)
Similarity:89/203 - (43%) Gaps:29/203 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :|:|.|::.:|:..:..|:|....:| :..:.|.:.  ||..:.|||....||..||..:::...
plant    27 EAVKQGSAAIGLRSRSHVVLACVNKA-QSELSSHQR--KIFKVDDHIGVAIAGLTADGRVLSRYM 88

  Fly   108 SAELDLHRLNTERRVPV------------VCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYC 160
            .:|...|....|..:||            ||.....:|.       .|..|::||:|.:|..|| 
plant    89 RSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRP-------YGVGLLVGGLDESGAHLY- 145

  Fly   161 IYPCGSNDKIPYA--AMGSGTLAAMSVLEHGWKPDLDLEQGKQ-LVREAISAGVFNDLGSGSNID 222
             |.|.|.:...|.  |:||.:.||.:.||.  |.:...|..|: |:::||.|......|......
plant   146 -YNCPSGNYFEYQAFAIGSRSQAAKTYLER--KFESFQESSKEDLIKDAIMAIRETLQGETLKSS 207

  Fly   223 LCVITAKG 230
            ||.::..|
plant   208 LCTVSVLG 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 52/197 (26%)
Pr_beta_C 240..274 CDD:463597
PAF2NP_175158.1 proteasome_alpha_type_1 6..215 CDD:239718 54/201 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.