DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R1 and psma6l

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_571870.2 Gene:psma6l / 83917 ZFINID:ZDB-GENE-010502-2 Length:252 Species:Danio rerio


Alignment Length:256 Identity:48/256 - (18%)
Similarity:93/256 - (36%) Gaps:46/256 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GLRSGFNFINCRRNAELLS---KGYEPPKAIK----TGTSIVGIIYKDGVILGADTRATEGPIVS 75
            |..:||:     |:..:.|   :.|:...|.|    :|.:.|||...|..:|....:.:: .::.
Zfish     4 GSNAGFD-----RHITIFSPEGRLYQVEYAFKAISQSGLTTVGIRGVDCAVLVTQKKVSD-TLLD 62

  Fly    76 DKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTER---------RVPV--VCASM 129
            ....:.:..:...|.|...|..||:..         .:||...|.         .|||  :|..:
Zfish    63 ASTMTNMFRITPRIGCVMTGHYADSRS---------QVHRARIEAGEWKYKFGYDVPVDALCRRL 118

  Fly   130 MLRRTLFRYQGH---IGAALVMGGVD-TTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGW 190
            .....::.....   :|..:::..:| ..||.||...|.|........::|.....|.|.||...
Zfish   119 ADLSQVYTQNAEMRPLGCCMMLISMDPQKGPMLYKCDPAGYFCGFRATSVGVKHTEANSYLEKKI 183

  Fly   191 KP--------DLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKGAVYLRTDTIASEK 243
            |.        :||.:...|:....:|:.:..|. ..:.:::.|:|.:...:.....:..|:
Zfish   184 KKMQKKKEEVELDFDSSVQMAISCLSSVLCMDF-KCTELEVAVVTKENPKFRTLSEVEIER 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 38/209 (18%)
Pr_beta_C 240..274 CDD:463597 1/4 (25%)
psma6lNP_571870.2 proteasome_alpha_type_6 8..226 CDD:239723 44/233 (19%)

Return to query results.
Submit another query.