DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PAC1

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_188850.1 Gene:PAC1 / 821774 AraportID:AT3G22110 Length:250 Species:Arabidopsis thaliana


Alignment Length:225 Identity:53/225 - (23%)
Similarity:96/225 - (42%) Gaps:36/225 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :||....|.:||:.||||:|..:.:.|...:.:..:..|::.:.||:.|..||..:|..::..|.
plant    26 EAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTA 90

  Fly   108 SAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH--------IGAALVMGGVDT-TGPQLYCIYP 163
            ..:...:....:..:||   ..:::......||:        .|.:.:..|.|. .|.|||...|
plant    91 RVQAQRYTFMYQEPMPV---EQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDP 152

  Fly   164 CGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITA 228
            .|:......||:|:...||.|:|:..:|.|...|:..:|.                   |.|:|.
plant   153 SGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELA-------------------LKVLTK 198

  Fly   229 KGAVYLRTDTIASEKGERLGKYGIKPNSTM 258
            .    :.:.::.|||.| |.:..:.|:.|:
plant   199 T----MDSTSLTSEKLE-LAEVYLTPSKTV 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 44/195 (23%)
Pr_beta_C 240..274 CDD:463597 7/19 (37%)
PAC1NP_188850.1 proteasome_alpha_type_4 3..215 CDD:239721 51/215 (24%)

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