DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PSMB3

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_002786.2 Gene:PSMB3 / 5691 HGNCID:9540 Length:205 Species:Homo sapiens


Alignment Length:198 Identity:49/198 - (24%)
Similarity:88/198 - (44%) Gaps:15/198 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GTSIVGIIYKDGVILGADTR-ATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAEL 111
            |.:::.:..|:.|.:.||.| ..:..:|: .:..||..:.|.:|...||.|.|.:.:.......|
Human     8 GGAVMAMKGKNCVAIAADRRFGIQAQMVT-TDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 71

  Fly   112 DLHRLNTERRV-PVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGSNDKI--PYA 173
            :|:.|...|:: |....||:......:..|......|:.|:|   |:.:..:.| |.|.|  |..
Human    72 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLD---PKTFKPFIC-SLDLIGCPMV 132

  Fly   174 A---MGSGTLAAM--SVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKGAVY 233
            .   :.|||.|..  .:.|..|:|::|.:...:.:.:|:...|..|..||..:.:.:| .|..:.
Human   133 TDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHII-EKDKIT 196

  Fly   234 LRT 236
            .||
Human   197 TRT 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 46/195 (24%)
Pr_beta_C 240..274 CDD:463597
PSMB3NP_002786.2 proteasome_beta_type_3 6..201 CDD:239728 49/198 (25%)
Blue background indicates that the domain is not in the aligned region.

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