DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psma3

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001025358.1 Gene:psma3 / 564370 ZFINID:ZDB-GENE-050913-120 Length:255 Species:Danio rerio


Alignment Length:173 Identity:43/173 - (24%)
Similarity:75/173 - (43%) Gaps:18/173 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            ||::..::.:||..||||:.|.: :.....:..:.:..:|.::..|:....||..||...::...
Zfish    29 KAVENSSTAIGIRCKDGVVFGVE-KLVLSKLYEEGSNKRIFNIDRHVGMAVAGLLADARSLSEVA 92

  Fly   108 SAELDLHRLNTERRVPVV-----CASMMLRRTLFRYQGHIGAALVMGGVD-TTGPQLYCIYPCGS 166
            ..|....|.|....:|:.     .|..:...||:......|.:.::|..| ..|||||.:.|.| 
Zfish    93 REEASSFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFILGSYDEDDGPQLYMVDPSG- 156

  Fly   167 NDKIPY----AAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVRE 205
               |.|    .|:|....||.:.:|.....|:..   ::||:|
Zfish   157 ---IAYGYWGCAIGKAKQAAKTEIEKLQMKDMTC---RELVKE 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 41/167 (25%)
Pr_beta_C 240..274 CDD:463597
psma3NP_001025358.1 proteasome_alpha_type_3 5..217 CDD:239720 43/173 (25%)
Blue background indicates that the domain is not in the aligned region.

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