DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psmb2

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001002609.1 Gene:psmb2 / 436882 ZFINID:ZDB-GENE-040718-353 Length:199 Species:Danio rerio


Alignment Length:163 Identity:42/163 - (25%)
Similarity:72/163 - (44%) Gaps:8/163 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHR 115
            ::||...|.|::.||..|....|....:..|:..|.:.|.....|.|.||..........:.|::
Zfish     4 LIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYK 68

  Fly   116 LNTERRVPVVCASMMLRRTLFRY-----QGHIGAALVMGGVD-TTGPQLYCIYPCGSNDKIPYAA 174
            :.....:....|:...|:.|..|     ..|:.  |::.|.| |.||.||.:....:..|.|:||
Zfish    69 MRNGYELSPAAAANFTRKNLADYLRSRTPYHVN--LLLAGYDETDGPGLYYMDYLSALAKAPFAA 131

  Fly   175 MGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAI 207
            .|.|....:|:|:..::|||..|:...|:::.:
Zfish   132 HGYGAFLTLSILDRYYRPDLTREEAVDLLKKCL 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 42/163 (26%)
Pr_beta_C 240..274 CDD:463597
psmb2NP_001002609.1 proteasome_beta_type_2 1..192 CDD:239727 42/163 (26%)
Blue background indicates that the domain is not in the aligned region.

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