DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Prosbeta3

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster


Alignment Length:190 Identity:41/190 - (21%)
Similarity:76/190 - (40%) Gaps:18/190 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GTSIVGIIYKDGVILGADTR-ATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAEL 111
            |..:|.:..||.|.:..|.| ..:...:| .:..|:.|:...::....|...|...:........
  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTIS-TDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRK 71

  Fly   112 DLHRLNTERRV-PVVCASMMLRRTLFRYQGHIGAAL---VMGGVDTTGPQLYCIYPCGSN----D 168
            :|:.....|.: |...::||   :.|.|:...|...   |:.|:|   |:....:.|..:    .
  Fly    72 NLYETRENREMCPKPFSAMM---SSFLYEHRFGPYFIEPVVAGLD---PKTMEPFICNMDLIGCP 130

  Fly   169 KIPYAAMGSGTLAAM--SVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
            ..|...:.:||.|..  .:.|..|||||:.:|..:::.::|......|..||....:.:|
  Fly   131 NAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYII 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 40/189 (21%)
Pr_beta_C 240..274 CDD:463597
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 41/190 (22%)
Blue background indicates that the domain is not in the aligned region.

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