DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psma8

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_998331.1 Gene:psma8 / 406445 ZFINID:ZDB-GENE-040426-2194 Length:251 Species:Danio rerio


Alignment Length:190 Identity:52/190 - (27%)
Similarity:82/190 - (43%) Gaps:8/190 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :|:|.|::.|||..||.|:||.:.::. ..:..::...||..|.:|:....||..||..::....
Zfish    26 EAVKKGSTAVGIRGKDIVVLGVEKKSV-AKLQEERTVRKICALDEHVCMAFAGLTADARIVINRA 89

  Fly   108 SAELDLHRLNTERRVPV-----VCASMMLRRTLFRYQGHIGAALVMGGVDTTG-PQLYCIYPCGS 166
            ..|...|||..|..|.|     ..|::..|.|....:...|.:.::.|.|..| |:||...|.|:
Zfish    90 RVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLYQTDPSGT 154

  Fly   167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
            .......|:|.........||..: .|..:......::.||.|.:......|.||:|.||
Zfish   155 YHAWKANAIGRSAKTVREFLEKNY-TDEAIASDNDAIKLAIKALLEVVQSGGKNIELAVI 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 49/184 (27%)
Pr_beta_C 240..274 CDD:463597
psma8NP_998331.1 proteasome_alpha_type_7 5..213 CDD:239724 50/188 (27%)
Blue background indicates that the domain is not in the aligned region.

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