DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psma5

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_991271.1 Gene:psma5 / 403011 ZFINID:ZDB-GENE-040625-96 Length:241 Species:Danio rerio


Alignment Length:202 Identity:51/202 - (25%)
Similarity:86/202 - (42%) Gaps:28/202 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :|||.|::.:||...:||.|..:.|.| .|::...:..||..:..||.|..:|..||.:.:....
Zfish    29 EAIKLGSTAIGIQTSEGVCLAVEKRIT-SPLMEPSSIEKIVEIDSHIGCAMSGLIADAKTLIDKA 92

  Fly   108 SAELDLHRLNTERRVPVVCASMMLRRTLFRY----------QGHIGAALVMGGVDTTGPQLYCIY 162
            ..|...|.......:.|...:..:.....::          ....|.||:.||||..|||||.:.
Zfish    93 RVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLYHMD 157

  Fly   163 PCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQG--------KQLVREAISAGVFNDLGSGS 219
            |.|:..:....|:||.:..|.|.|:..:...:.|:..        ||::.|.::|         :
Zfish   158 PSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKDAIKSSLTILKQVMEEKLNA---------T 213

  Fly   220 NIDLCVI 226
            ||:|..:
Zfish   214 NIELATV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 47/196 (24%)
Pr_beta_C 240..274 CDD:463597
psma5NP_991271.1 proteasome_alpha_type_5 8..220 CDD:239722 51/200 (26%)
Blue background indicates that the domain is not in the aligned region.

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