DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Prosalpha6T

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:257 Identity:65/257 - (25%)
Similarity:107/257 - (41%) Gaps:26/257 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNC--SKIHHLQDHIYCCGAGTAADTEMIT- 104
            :|:|.|.:.||:...|..:|.|..|.::     |.|.  .||..:.||:....||..||..::. 
  Fly    27 EAVKQGAATVGLKGTDYAVLAALCRTSK-----DTNTLQRKIMPVDDHVGMSIAGLTADARVVCQ 86

  Fly   105 -LTTSAELDLHRLNTERRVPVVCASM--MLRRTLFRYQGH-IGAALVMGGVDTTGPQLYCIYPCG 165
             :.|......|..|.|..|..:.:::  .|:.|..||... .|..|::.|.|..||.:|.:.|..
  Fly    87 YMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGLLVAGYDEQGPHIYQVMPTA 151

  Fly   166 SNDKIPYAAMGSGTLAAMSVLEHGWK--PDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCV--- 225
            :.......|:||.:.:|.:.||...:  .|.|::   :|:..||.| :...|||....:|.:   
  Fly   152 NVLNCKAMAIGSRSQSARTYLERNMESFEDCDMD---ELICHAIQA-IRGSLGSDDVENLTINVA 212

  Fly   226 ITAKGAVYLRTDTIASEKGERLGKYGIKPNSTMVTSISVLSLQVTDERIYAVDDQQPGTSGV 287
            |..|...:.......::|..:|.|....|.......:|...:...|     :.|..|.:|||
  Fly   213 IVGKDVPFKMFTEAENQKYVKLVKAMDPPLEADHDPLSEEGMSDDD-----MTDHGPSSSGV 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 51/198 (26%)
Pr_beta_C 240..274 CDD:463597 6/33 (18%)
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 53/196 (27%)

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