DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psmb8a

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:247 Identity:62/247 - (25%)
Similarity:114/247 - (46%) Gaps:31/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LFPFSARKANTSADFVGLR-------SGFNF-INCRRNAELLSKGYEPPKAIKT----------- 47
            |...|..|.|:::.| |.:       :.::| ..|:..|  :..|.:|.|.:|:           
Zfish     3 LLDVSGYKYNSASQF-GFKQTLLDRSNHYSFGTKCQEFA--VPVGVDPSKFLKSCSCEDGVCIDL 64

  Fly    48 --GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAE 110
              ||:.:...::.|||:..|:||:.|..::.|..:|:..:..::....:|:|||.:......:.|
Zfish    65 NHGTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKE 129

  Fly   111 LDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMG----GVDTTGPQLYCIYPCGSNDKIP 171
            ..|::|..::|:.|..||.:|...:..|:   |..|.||    |.|..||.||.:...|:.....
Zfish   130 CRLYKLRNKQRISVSAASKLLSNMMLGYR---GMGLSMGSMICGWDKQGPGLYYVDDNGTRLSGR 191

  Fly   172 YAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDL 223
            ..:.|.|...|..|::.|::.|:.:|:..:|.|..|:.....|..||..::|
Zfish   192 MFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 48/179 (27%)
Pr_beta_C 240..274 CDD:463597
psmb8aNP_571467.3 proteasome_beta_type_5 68..255 CDD:239730 48/179 (27%)
Blue background indicates that the domain is not in the aligned region.

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