DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R1 and Psma4

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_058977.1 Gene:Psma4 / 29671 RGDID:61846 Length:261 Species:Rattus norvegicus


Alignment Length:265 Identity:55/265 - (20%)
Similarity:114/265 - (43%) Gaps:40/265 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :||....:.:||:..|||:|.|:.|.....:.......||:.|.:.:.|..||..:|..:  ||.
  Rat    26 EAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANV--LTN 88

  Fly   108 SAELDLHRLNTERRVPVVCASMM-----LRRTLFRYQGH--IGAALVMGGVDT-TGPQLYCIYPC 164
            ...|...|...:.:.|:.|..::     :::...::.|.  .|.:|:..|.|. .|.|||...|.
  Rat    89 ELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPS 153

  Fly   165 GSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAG--VFNDLGSGSNIDLCVIT 227
            |:........:|:.:.||:|:|:.      |.::|:..::.|::..  |.|     ..:|:..::
  Rat   154 GNYGGWKATCIGNNSAAAVSMLKQ------DYKEGEMTLKSALALAVKVLN-----KTMDVSKLS 207

  Fly   228 AKGAVYLRTDTIASEKGERLGKYGIKPNSTMVTSISVLSLQVTDERIYAVDDQQPGTSGVQLDSQ 292
            |:   .:...|:..|.|:              |.|.||..:..::.|...::::......:.:.:
  Rat   208 AE---KVEIATLTRENGK--------------TVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKE 255

  Fly   293 QADEE 297
            |.:::
  Rat   256 QREKD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 44/196 (22%)
Pr_beta_C 240..274 CDD:463597 6/33 (18%)
Psma4NP_058977.1 proteasome_alpha_type_4 3..216 CDD:239721 46/205 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..261 1/21 (5%)

Return to query results.
Submit another query.