DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psma5

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus


Alignment Length:202 Identity:50/202 - (24%)
Similarity:87/202 - (43%) Gaps:28/202 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :|||.|::.:||...:||.|..:.|.| .|::...:..||..:..||.|..:|..||.:.:....
Mouse    29 EAIKLGSTAIGIQTSEGVCLAVEKRIT-SPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKA 92

  Fly   108 SAELDLHRLNTERRVPVVCASMMLRRTLFRY----------QGHIGAALVMGGVDTTGPQLYCIY 162
            ..|...|.......:.|...:..:.....::          ....|.||:.||||..||||:.:.
Mouse    93 RVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMD 157

  Fly   163 PCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQG--------KQLVREAISAGVFNDLGSGS 219
            |.|:..:....|:||.:..|.|.|:..:...:.|::.        ||::.|.::|         :
Mouse   158 PSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNA---------T 213

  Fly   220 NIDLCVI 226
            ||:|..:
Mouse   214 NIELATV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 46/196 (23%)
Pr_beta_C 240..274 CDD:463597
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 50/200 (25%)
Blue background indicates that the domain is not in the aligned region.

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