DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psma4

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_036096.1 Gene:Psma4 / 26441 MGIID:1347060 Length:261 Species:Mus musculus


Alignment Length:265 Identity:55/265 - (20%)
Similarity:114/265 - (43%) Gaps:40/265 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
            :||....:.:||:..|||:|.|:.|.....:.......||:.|.:.:.|..||..:|..:  ||.
Mouse    26 EAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANV--LTN 88

  Fly   108 SAELDLHRLNTERRVPVVCASMM-----LRRTLFRYQGH--IGAALVMGGVDT-TGPQLYCIYPC 164
            ...|...|...:.:.|:.|..::     :::...::.|.  .|.:|:..|.|. .|.|||...|.
Mouse    89 ELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPS 153

  Fly   165 GSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAG--VFNDLGSGSNIDLCVIT 227
            |:........:|:.:.||:|:|:.      |.::|:..::.|::..  |.|     ..:|:..::
Mouse   154 GNYGGWKATCIGNNSAAAVSMLKQ------DYKEGEMTLKSALALAVKVLN-----KTMDVSKLS 207

  Fly   228 AKGAVYLRTDTIASEKGERLGKYGIKPNSTMVTSISVLSLQVTDERIYAVDDQQPGTSGVQLDSQ 292
            |:   .:...|:..|.|:              |.|.||..:..::.|...::::......:.:.:
Mouse   208 AE---KVEIATLTRESGK--------------TVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKE 255

  Fly   293 QADEE 297
            |.:::
Mouse   256 QREKD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 44/196 (22%)
Pr_beta_C 240..274 CDD:463597 6/33 (18%)
Psma4NP_036096.1 proteasome_alpha_type_4 3..216 CDD:239721 46/205 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..261 1/21 (5%)

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