DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb5

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:247 Identity:65/247 - (26%)
Similarity:109/247 - (44%) Gaps:34/247 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FVGLRSGFNFINCRRNAELLSKG------------------YEPPKAIKTGTSIVGIIYKDGVIL 62
            |.||..|         |:||..|                  .||...:..||:.:...:..|||:
Mouse    18 FFGLGGG---------ADLLDLGPGSPGDGLSLAAPSWGVPEEPRIEMLHGTTTLAFKFLHGVIV 73

  Fly    63 GADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCA 127
            .||:|||.|..::.:...|:..:..::....||.|||........:.:..::.|..:.|:.|..|
Mouse    74 AADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAA 138

  Fly   128 SMMLRRTLFRYQGHIGAALVMG----GVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEH 188
            |.:|...:::|:   |..|.||    |.|..||.||.:...|:.......::|||::.|..|::.
Mouse   139 SKLLANMVYQYK---GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDR 200

  Fly   189 GWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKGAVYLRTDTIA 240
            |:..||.:|:...|.|.||....:.|..||..::|..:...|.:.:.:|.:|
Mouse   201 GYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVA 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 52/190 (27%)
Pr_beta_C 240..274 CDD:463597 1/1 (100%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 52/189 (28%)

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