DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psmb5

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_002941560.1 Gene:psmb5 / 100379732 XenbaseID:XB-GENE-975048 Length:257 Species:Xenopus tropicalis


Alignment Length:205 Identity:55/205 - (26%)
Similarity:101/205 - (49%) Gaps:7/205 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EPPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMIT 104
            ||......||:.:...::.|||:..|:|||.|..::.:...|:..:..::....||.|||.....
 Frog    45 EPGIEFLHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWE 109

  Fly   105 LTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMG----GVDTTGPQLYCIYPCG 165
            ...:.:..::.|..:.|:.|..||.:|...:::|:   |..|.||    |.|..||.||.:...|
 Frog   110 RLLARQCRIYELRNKERISVAAASKLLANMVYQYK---GMGLSMGTMICGWDKRGPGLYYVDSEG 171

  Fly   166 SNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKG 230
            :.......::|||::.|..||:.|:..::::|:.::|.|.:|....:.|..||..::|..:...|
 Frog   172 NRVSGSVFSVGSGSMYAYGVLDRGYNYEMEVEEAQELARRSIYQATYRDAYSGGVVNLYHVREDG 236

  Fly   231 AVYLRTDTIA 240
            .|.:..|.:|
 Frog   237 WVRVSQDDVA 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 50/190 (26%)
Pr_beta_C 240..274 CDD:463597 1/1 (100%)
psmb5XP_002941560.1 proteasome_beta_type_5 54..241 CDD:239730 50/189 (26%)

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