DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb6l1

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001316812.1 Gene:Psmb6l1 / 100360846 RGDID:2321312 Length:238 Species:Rattus norvegicus


Alignment Length:199 Identity:53/199 - (26%)
Similarity:101/199 - (50%) Gaps:2/199 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ELLSKGYEPPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTA 97
            |.|:..:| .:.:.|||:|:.:.:..||:||||:|.|.|..::::...|:..:.|||:||.:|:|
  Rat    19 EALTPDWE-NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSA 82

  Fly    98 ADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVD-TTGPQLYCI 161
            |||:.:....:.:|..|.:.......|..|:.:.:...:||:..:.|.:::.|.| ..|.|:|.:
  Rat    83 ADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSV 147

  Fly   162 YPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
            ...|...:..:|..|||:......::..::..:..::..|....|::..:..|..||..|.|..|
  Rat   148 PMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAI 212

  Fly   227 TAKG 230
            ...|
  Rat   213 QQSG 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 48/183 (26%)
Pr_beta_C 240..274 CDD:463597
Psmb6l1NP_001316812.1 proteasome_beta_type_6 34..221 CDD:239731 48/183 (26%)
Blue background indicates that the domain is not in the aligned region.

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