DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and psmb11b

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001268731.1 Gene:psmb11b / 100331481 ZFINID:ZDB-GENE-170530-2 Length:362 Species:Danio rerio


Alignment Length:262 Identity:64/262 - (24%)
Similarity:113/262 - (43%) Gaps:53/262 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RSGFNFINCRRNAELL------------SKGYEPPKAIKTGTSIVGIIYKDGVILGADTRATEGP 72
            :|..||....:::.||            |:....|..:..||:.:|..::.|||..||||::...
Zfish    69 KSPINFGQTPQSSNLLDVDHMHPTLPYISQSGALPFTLSHGTTTLGFAFQGGVIAAADTRSSCAG 133

  Fly    73 IVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFR 137
            .|:.....|:..:..|:....:||:||..:.....:.||.|::|...||:....|:.:|...|..
Zfish   134 KVACPASPKVLPIHSHLVGTTSGTSADCALWKRILARELRLYQLRHRRRLSTGGAAKLLSHMLHP 198

  Fly   138 YQG-HIGAALVMGGVD-----------------TT-------------------GPQLYCIYPCG 165
            ::| .:..|..:.|.|                 ||                   ||::  :|.|.
Zfish   199 FKGTELCVAATLCGWDGDEDQDNEQPMTERYANTTLTSKSSSQSAASSGLSGVRGPRV--VYVCS 261

  Fly   166 SNDKIPYA--AMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITA 228
            ...::..|  ::|||:..|.|:|:.|.:..:..::...:.|||:....:.|..||:|:||..:||
Zfish   262 DGLRLQGALFSVGSGSPYAYSILDGGVRWGMSAQEAAAVAREAVYRATYRDAYSGNNVDLYHVTA 326

  Fly   229 KG 230
            ||
Zfish   327 KG 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 56/221 (25%)
Pr_beta_C 240..274 CDD:463597
psmb11bNP_001268731.1 proteasome_beta_type_5 110..333 CDD:239730 56/221 (25%)
Blue background indicates that the domain is not in the aligned region.

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