DRSC/TRiP Functional Genomics Resources

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Protein Alignment: lin-52 and wuc

Sequence 1:NP_001284908.1 Gene:lin-52 FlyBaseID:FBgn0029800 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001097291.1 Gene:wuc FlyBaseID:FBgn0033770 Length:136 Species:Drosophila melanogaster

Alignment Length:143 Identity:41/144 (28%)
Similarity:57/144 (40%) Gaps:35/144 (24%)


  Fly    39 KDVPEVKERPITPEDELISMETLRPSPVQWP----ERFPGMDEFLSMSDTPMYTRSTNYTSNLTD 99
            |.|.:..:|..:|.||   ..||...|:::.    ||.....|....|.     |......::.|
  Fly     2 KKVTKSIKREGSPSDE---EYTLEEDPIEFELEKMERGSSNGESEEESQ-----RDQKQADSIID 58

  Fly   100 D---------------------DMVKINELAQLPPEDLIDKIKSMHDEIYQLGLREAMEMTRGKL 143
            |                     |:.|:.||:.|||..:..:|:.|..|||:|...||.|:.|.|.
  Fly    59 DMVEQNDQEQEAAGEQDVERENDLRKMYELSLLPPAAIAAQIQQMEKEIYELSQWEARELIRSKH 123

  Fly   144 LGIFD--RDRAPK 154
            |.||.  |.||.|
  Fly   124 LRIFGNCRRRANK 136

Known Domains:


GeneSequenceDomainRegion External IDIdentity
lin-52NP_001284908.1 LIN52 55..147 CDD:287062 30/117 (26%)
wucNP_001097291.1 LIN52 <57..127 CDD:287062 22/70 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR31489
RoundUp 00.000 Not matched by this tool.
11.100

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