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Protein Alignment: lin-52 and Lin52
Sequence 1: | NP_001284908.1 |
Gene: | lin-52 |
FlyBaseID: | FBgn0029800 |
Length: | 157 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006515764.1 |
Gene: | Lin52 |
MGIID: | 3045391 |
Length: | 126 |
Species: | Mus musculus |
Alignment Length: | 84 |
Identity: | 29/85 (34%) |
Similarity: | 48/85 (56%) |
Gaps: | 1/85 (1%) |
Fly 52 EDELISMETL-RPSPVQWPERFPGMDEFLSMSDTPMYTRSTNYTSNLTDDDMVKINELAQLPPED 115
|..|:|.|.| |.||..|||:.||:.||.:...:|:.:....:.:.:..||:..:.||..|...:
Mouse 15 EASLLSFEKLDRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAEIERDDIDMLKELGSLTTAN 79
Fly 116 LIDKIKSMHDEIYQLGLRE 134
|::|::.:.:..|||||.|
Mouse 80 LMEKVRGLQNLAYQLGLDE 98
|
Known Domains:
Gene | Sequence | Domain | Region |
External ID | Identity |
lin-52 | NP_001284908.1 |
LIN52 |
55..147 |
CDD:287062 |
28/82 (34%) |
Lin52 | XP_006515764.1 |
LIN52 |
18..98 |
CDD:287062 |
27/80 (34%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
|
|
|
C166191967 |
eggNOG |
1 |
0.900 |
|
|
|
E1_KOG4402 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
|
|
|
|
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
|
|
|
FOG0005092 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
|
|
LDO |
PTHR31489 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
|
|
|
|
|
6 | 5.900 |
|
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