DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and cmlc1

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_571767.2 Gene:cmlc1 / 64671 ZFINID:ZDB-GENE-030522-1 Length:196 Species:Danio rerio


Alignment Length:145 Identity:69/145 - (47%)
Similarity:100/145 - (68%) Gaps:6/145 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDN--RGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDER----ISFEVFL 73
            :|||::||.|||.  .|:.||:.:|.|:.:||||.|||.:||.....:.|.:|.    :.||.||
Zfish    52 IEEFRDAFTLFDETPTGEMKIRYAQCGDVMRALGHNPTNADVLTVLGKPKAEEMNTKYLDFETFL 116

  Fly    74 PIYQAISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLANMEDQQ 138
            |:.|.||:|:...|.:||:||||.|||:.:|.:..|||||:|.|||||:|::||::|:|..||..
Zfish   117 PMLQHISRAKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEDEVDRLMAGQEDAN 181

  Fly   139 GNINYEEFVRMVMSG 153
            |.|||..|::.::||
Zfish   182 GCINYTSFIKHILSG 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 67/142 (47%)
cmlc1NP_571767.2 PTZ00184 48..195 CDD:185504 67/142 (47%)

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