DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and Cabp2

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_574595.3 Gene:Cabp2 / 499298 RGDID:1563670 Length:221 Species:Rattus norvegicus


Alignment Length:143 Identity:49/143 - (34%)
Similarity:80/143 - (55%) Gaps:11/143 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDERISFEVFLPIYQAI 79
            :||.|.||..||...||.|...::|.|:|.||..|||.::.:.:.|:. ..::.||.|:   :.:
  Rat    81 IEELQVAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQIS-GGKVDFEDFV---ELM 141

  Fly    80 SKARSGDTAD-----DFIEGLRHFDKDASGYISSAELRHLL-TTLGEKLTDEEVEQLLANME-DQ 137
            ......:|||     :..:..|.||.:..|.||..|||..| ..|||:|:..||:::|.::: :.
  Rat   142 GPKLLAETADMIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNG 206

  Fly   138 QGNINYEEFVRMV 150
            .|.:::||||||:
  Rat   207 DGLVDFEEFVRMM 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 49/143 (34%)
Cabp2XP_574595.3 PTZ00184 75..219 CDD:185504 48/141 (34%)

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