DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and myl12b

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001004813.1 Gene:myl12b / 448060 XenbaseID:XB-GENE-991019 Length:172 Species:Xenopus tropicalis


Alignment Length:152 Identity:51/152 - (33%)
Similarity:81/152 - (53%) Gaps:7/152 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TAHVKQTF--TTLEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDERI 67
            |::|...|  :.::||:||||:.|...||.|....:.:.|.:|.:|||:..:....::....  |
 Frog    19 TSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLEKNPTDEYLDAMMNEAPGP--I 81

  Fly    68 SFEVFLPIYQAISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLA 132
            :|.:||.::.  .|....|..|........||::..|.|....||.||||:|::.|||||::|..
 Frog    82 NFTMFLTMFG--EKLNGTDPEDVIRNAFACFDEEGIGSIQEDTLRELLTTMGDRFTDEEVDELFR 144

  Fly   133 NME-DQQGNINYEEFVRMVMSG 153
            ... |::||.||.||.|::..|
 Frog   145 EAPIDKKGNFNYNEFTRILKHG 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 47/138 (34%)
myl12bNP_001004813.1 PTZ00184 25..163 CDD:185504 48/141 (34%)

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