DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and tnnc1

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001004776.1 Gene:tnnc1 / 447990 XenbaseID:XB-GENE-480515 Length:161 Species:Xenopus tropicalis


Alignment Length:153 Identity:49/153 - (32%)
Similarity:88/153 - (57%) Gaps:6/153 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YTAHVKQ-TFTTLEEFQEAFNLF-DNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPD-- 64
            |.|.|:| |.....||:.||::| .:..||.|...::|:.:|.||||||..::::...::..|  
 Frog     5 YKAAVEQLTEEQKNEFRAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69

  Fly    65 ERISFEVFLPIYQAISKARS-GDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVE 128
            ..:.|:.||.:.....|..| |.:.::..:..|.|||:|.|||...||:.:|...||.:|::::|
 Frog    70 GTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLEATGETITEDDIE 134

  Fly   129 QLLANME-DQQGNINYEEFVRMV 150
            :|:.:.: :..|.|:|:||:..:
 Frog   135 ELMRDGDKNNDGRIDYDEFLEFM 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 44/142 (31%)
tnnc1NP_001004776.1 PTZ00184 9..157 CDD:185504 47/147 (32%)

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