DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlc-c and CG17770

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_651432.1 Gene:CG17770 / 43118 FlyBaseID:FBgn0039374 Length:164 Species:Drosophila melanogaster


Alignment Length:140 Identity:45/140 - (32%)
Similarity:86/140 - (61%) Gaps:7/140 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDERISFEVFLPIYQAI 79
            :::.:.||:|||::....|.::.:.:.:.::...|::.::::...::..|.  |.|::|..:..|
  Fly    25 VKDLEIAFSLFDDQDTKVIPITNLRQLMLSVAHYPSDMELQEIQAEIDADG--SGELYLSDFLHI 87

  Fly    80 SKARSGD--TADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLL--ANMEDQQGN 140
            ...|..:  |.|:.|...|.|||:.:|.||.:|.||::..:||:|||:|||:::  || .|.:||
  Fly    88 MSQRYANMSTEDEIIAAFRVFDKEGTGLISESEFRHIMQNMGEQLTDDEVEEIIRDAN-SDLEGN 151

  Fly   141 INYEEFVRMV 150
            |:|..||||:
  Fly   152 IDYVRFVRMM 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 45/140 (32%)
CG17770NP_651432.1 PTZ00184 19..161 CDD:185504 44/138 (32%)

Return to query results.
Submit another query.