DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and tnnc2

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_012827046.1 Gene:tnnc2 / 394554 XenbaseID:XB-GENE-480259 Length:163 Species:Xenopus tropicalis


Alignment Length:140 Identity:49/140 - (35%)
Similarity:84/140 - (60%) Gaps:4/140 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPD--ERISFEVFL-PIY 76
            :.||:.||::||..|.|.|...::|..:|.||||||:.::.....::..|  ..|.||.|| .:.
 Frog    20 IAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 84

  Fly    77 QAISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLANME-DQQGN 140
            :.:.:...|.:.::..|..|.|||:|.|||...||..:|.:.||.:||||:|:|:.:.: :..|.
 Frog    85 RQMKEDAQGKSEEELAECFRIFDKNADGYIDGEELAEILRSSGESITDEEIEELMKDGDKNNDGK 149

  Fly   141 INYEEFVRMV 150
            |:::||::|:
 Frog   150 IDFDEFLKMM 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 49/140 (35%)
tnnc2XP_012827046.1 PTZ00184 15..159 CDD:185504 48/138 (35%)

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