DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and Cabp5

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001102377.1 Gene:Cabp5 / 365194 RGDID:1308108 Length:173 Species:Rattus norvegicus


Alignment Length:145 Identity:42/145 - (28%)
Similarity:78/145 - (53%) Gaps:12/145 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPD--ERISFEVFLPIYQ 77
            ::|.:|||..||...||.|....:|..:|.:|..|||.::.:...|::.:  .|:.||.|:   :
  Rat    30 IDELREAFLEFDKDRDGFISYKDLGNLMRTMGYMPTEMELTELGQQIRMNLGGRVDFEDFV---E 91

  Fly    78 AISKARSGDTA-----DDFIEGLRHFDKDASGYISSAELRHLL-TTLGEKLTDEEVEQLLANME- 135
            .::.....:||     .:..:..:.||.:..|.|:.|||:..: ..||||||..|:.:::...: 
  Rat    92 LMTPKLLAETAGMIGVQEMRDAFKEFDANGDGEITLAELQQAMQRLLGEKLTPREIAEVVQEADI 156

  Fly   136 DQQGNINYEEFVRMV 150
            :..|.:::||||:|:
  Rat   157 NGDGTVDFEEFVKMM 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 42/145 (29%)
Cabp5NP_001102377.1 PTZ00184 25..171 CDD:185504 41/143 (29%)

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