DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and myl12.1

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_999864.1 Gene:myl12.1 / 326719 ZFINID:ZDB-GENE-030131-4918 Length:172 Species:Danio rerio


Alignment Length:153 Identity:51/153 - (33%)
Similarity:83/153 - (54%) Gaps:9/153 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TAHVKQTF--TTLEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVK-KCTHQLKPDER 66
            |::|...|  :.::||:||||:.|...||.|....:.:.|.:||:||.:..:: ..|....|   
Zfish    19 TSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPADDYLEAMMTEAPGP--- 80

  Fly    67 ISFEVFLPIYQAISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLL 131
            |:|.:||.::.  .|....|..:........||::.:|:|....||.||||:|::.|||||::|.
Zfish    81 INFTMFLTMFG--EKLNGTDPEEVIRNAFACFDEEGTGFIHEDYLRELLTTMGDRFTDEEVDELF 143

  Fly   132 ANME-DQQGNINYEEFVRMVMSG 153
            .... |::.|.||.||.|::..|
Zfish   144 REAPIDKKSNFNYVEFTRILKHG 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 47/139 (34%)
myl12.1NP_999864.1 PTZ00184 25..163 CDD:185504 48/142 (34%)

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