DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and mlc-1

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_510829.2 Gene:mlc-1 / 181776 WormBaseID:WBGene00003369 Length:170 Species:Caenorhabditis elegans


Alignment Length:142 Identity:37/142 - (26%)
Similarity:65/142 - (45%) Gaps:6/142 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TLEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDERISFEVFLPIYQA 78
            |::||:|||.:.|...||.|..|.:.:...::||...:|.:.....:....  |:|.|||.::. 
 Worm    25 TIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP--INFTVFLTLFG- 86

  Fly    79 ISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLL-TTLGEKLTDEEVEQLLANMED-QQGNI 141
             .:....|.....|.....|||...|.|...:|..:| ...||.|.::||:.:...... :.|.:
 Worm    87 -ERLTGTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEV 150

  Fly   142 NYEEFVRMVMSG 153
            :|:.|..::.:|
 Worm   151 DYKAFAHLITTG 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 36/139 (26%)
mlc-1NP_510829.2 PTZ00184 18..160 CDD:185504 36/138 (26%)

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