DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and cmd-1

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_503386.1 Gene:cmd-1 / 178614 WormBaseID:WBGene00000552 Length:149 Species:Caenorhabditis elegans


Alignment Length:139 Identity:62/139 - (44%)
Similarity:93/139 - (66%) Gaps:5/139 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDER--ISFEVFLPIYQ 77
            :.||:|||:|||..|||.|...::|..:|:|||||||::::...:::..|..  |.|..||.:  
 Worm    10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-- 72

  Fly    78 AISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLANME-DQQGNI 141
            ...|.:..|:.::..|..|.||||.:|:||:|||||::|.||||||||||::::...: |..|.:
 Worm    73 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137

  Fly   142 NYEEFVRMV 150
            ||||||.|:
 Worm   138 NYEEFVTMM 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 62/139 (45%)
cmd-1NP_503386.1 PTZ00184 1..149 CDD:185504 62/139 (45%)

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